rs237839429 SNP Detail

Summary

• ID
  rs237839429
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55400170 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACAAGGTT CAGATGCTGA
  ACTGGCTGCC TCCCTGAGTG CTCAGAAAAC AAAGCTTTCA TCTTTAAGCT TTGGTATCTG
  AAGTGAGTGA GTTTTCTTGG CTTCCACCCG GATCTGAACA GTTCCAAGTC ATCTTGTGGG
  CACTGGAAAC TGAATGTGAG TCCTCTACAC AAAAGGAACT CAGGCCACTA GGCGTGGTGG
  Y
  AAGAGCCACT TGGCTTTTCC CACCAAGCCA TCTTTCTGGT TGATTATTTA TTTATCCAGA
  CAGGGCATTT CAATGTAGCT CTGGTTGTCT TGGAGCTCAC TATGTAGACC AGGCCTTGAA
  CTGAGAGATC CTCCTGCCGC TCTCTCATGA GTGCTGGGAT TAAAGGCATG CACCACCACT
  GCCTGGCCTT TTTGTTGTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324642399	CHEV_14_55781550	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237839429					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55400170 () rs orientation: forward

Symbol	Name	Function Class
Gm23596	predicted gene, 23596	1105 bp upstream
Rr289297	regulatory region 289297	570 bp distal
Rr292734	regulatory region 292734	1630 bp proximal
Rr297245	regulatory region 297245	1169 bp distal
Rr404111	regulatory region 404111	953 bp downstream