rs237850111 SNP Detail

Summary

• ID
  rs237850111
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:103911101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAGGGTCT GAAGGGAAAA
  GAGGGGACTT CAGAAGGCAT GGAAAGGCAA GGAAATTTGT TTTAATTTGA GAAAGGAAAT
  GAGTCAGGGA GTGGGGGGGA AATCTAGAGG GAGAAGGGAA GTATGGAAGA AATGCAGCTG
  AGGTGCAGTC ACTAGGTGGG TGGGAAGTGT GCTCCTTGCC CTCTGAGCTC TTGAAAACTG
  Y
  CATTCTCCTG GAATCCACAT AACCTAGAAA GAATTCAGCA GGAGGGGGAG GAAGTAAGGG
  AGGGCAAAGG AAGAATATGA ATGTGCTTAC AGTATATTGT AGGCAAGTAT GAAATTGTCA
  AACTTTTAAT TAAAAGATAA AAATGAGAAA GCTCACCTGG ACCTGTGCTC ACTGATGGTG
  GTGAGGTCTG CCAGGGTCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320443668	CHEV_2_103920913	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237850111					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103911101 () rs orientation: forward

Symbol	Name	Function Class
Cd59b	CD59b antigen	Intron
Rr562020	regulatory region 562020	1632 bp distal
Rr562021	regulatory region 562021	773 bp proximal
Rr562022	regulatory region 562022	1795 bp proximal