rs237882285 SNP Detail

Summary

• ID
  rs237882285
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:176718994 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttctttaaa cctagagaaa ttatttgcat
  agagatttct ttagagaaaa taaccaaatg gtaaaaggta tatgaaagga cacttaccat
  taactgtcag agggatgtaa caaaactcat gtgagatacc acactacatc TCATAACCAA
  W
  TGGTAAAAGG CATATGAAAG GACACTTACC ATTAACTGGC AGAGGGACAT GGCCAAACTC
  ATGTGAGAAT CCATACCACA TCTCATAAAC ATAGCTCTAA TTTAAAAGAC AATAATAATA
  ggctggtgag gtggctcagt agtcagaaac                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320158158	CHEV_1_178821559	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237882285					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:176718994 () rs orientation: forward

Symbol	Name	Function Class
Gm37490	predicted gene, 37490	1198 bp downstream
Rr423928	regulatory region 423928	536 bp distal
Sdccag8	serologically defined colon cancer antigen 8	within coordinates