rs237901841 SNP Detail

Summary

• ID
  rs237901841
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:59738650 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACAACTGCT TCTTTCTCAT AAAAATCAGA
  GATACTagcc cagcagtgat ggcgcatacc tttaatccta gcactagaga gtcagaggca
  gtcagatttc tgtaggccag aatggtctac agagtcagtt ccaggacagc cagggttaca
  M
  tgagaaaccc tgtcttgaag aaGGAAAGta tttatttatt tatttattta tttatttaGA
  GATACTGAAA ATGTTCTGCA ATGTAAAGAT AACACCCTGA GGTATGCAAT TGTAGGGCTA
  CAGATGTCAT TAATACCACG ATTTGCTAGC                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319739035	CHEV_1_59756335	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237901841					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:59738650 () rs orientation: forward

Symbol	Name	Function Class
Nop58	NOP58 ribonucleoprotein	within coordinates
Rr371359	regulatory region 371359	67 bp downstream
Rr411703	regulatory region 411703	1377 bp distal
Tssr6887	transcription start site region 6887	1416 bp downstream
Tssr11836	transcription start site region 11836	1712 bp upstream