rs237930575 SNP Detail

Summary

• ID
  rs237930575
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:111935294 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCATGCAT GGATATGCTT
  GGTCATGTTT GTAGTTATCC TGGGATGCAT GTGGCTTGTG GATACATGCG TGCTTAGCTA
  ATTTCTAAGT AGACTGTGAG CCTCCTGAGA GTCACTGCAA GCAGGGACTG CTGGTCAATT
  GCAAGGCTCT GGGTGCCTTA AAGGTGAAAG CGAGCCAAAT TCTTGTGCCC TTACACCCCA
  Y
  CCCTCCCAGT CAGGGAGGCA CCGATTGGTG AGCCAAAGCT ATGCCTCAAC CTCAGCTCTC
  AAAACAGCAA TACTAAGCTG ATGCCAGAAA GCTTGCCTTA GCCTGAGAAG TACAGCTTCC
  TCCAGACCAC CTACTTACTC AGAGACTGGT AGAAAAAGAA GGTGTTTGCA TAGCAGGAAC
  TGAAAGAGTA GTAGTGAAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322412411	CHEV_7_119479601	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237930575					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:111935294 () rs orientation: forward

Symbol	Name	Function Class
Mical2	microtubule associated monooxygenase, calponin and LIM domain containing 2	within coordinates
Tssr68564	transcription start site region 68564	506 bp upstream