rs237934468 SNP Detail

Summary

• ID
  rs237934468
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:101897980 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATGGCCCA ACCTACTCTC
  CCCACTGGTT GGAACCAGTA AGTGCTAGGA GACAGGAACC TTAAAGCTAG TTCCCCCTGA
  CCCCCCTCCC ACACAACACA CCACTACACA CACACTCCTA GGCTGCCTTC CTAAGAATCA
  GGGTAGTTTG ATTTCCCATG GACTTTCTCA CTAATCTTAT TCTTGTGTCA CCCAACCCTG
  M
  CTGCTACAGA CTGCTTCCCC TTGCCTAACC ACAGTGTCAC CCACCGCAGG TTCCCTTCAT
  TCTGCCGGCT TCTGCTCTGG GCCTTCTCAA GGCTGAGGGC AGTTATTTTG TCTCTAAGAG
  ATAAAGAACA CCAAAACTTG CATGTTCACG GGCGTGTGCA CATGTTTAAT CATCTCCATC
  ATCGGGAGGT TGCAGCCAGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322353642	CHEV_7_109397287	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237934468					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:101897980 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19524	CpG island 19524	869 bp proximal
Rhog	ras homolog family member G	within coordinates
Rr652561	regulatory region 652561	1242 bp distal
Rr652562	regulatory region 652562	within coordinates
Rr652563	regulatory region 652563	1305 bp proximal
Tssr2354	transcription start site region 2354	1486 bp upstream
Tssr68327	transcription start site region 68327	1015 bp downstream
Tssr68328	transcription start site region 68328	847 bp upstream
Tssr68329	transcription start site region 68329	929 bp upstream
Tssr68330	transcription start site region 68330	1447 bp upstream
Tssr73938	transcription start site region 73938	1686 bp upstream
Tssr73939	transcription start site region 73939	589 bp downstream
Tssr73940	transcription start site region 73940	639 bp downstream
Tssr73941	transcription start site region 73941	681 bp downstream
Tssr73942	transcription start site region 73942	769 bp downstream
Tssr73943	transcription start site region 73943	1302 bp downstream
Tssr73944	transcription start site region 73944	1313 bp downstream
Tssr73945	transcription start site region 73945	1354 bp downstream
Tssr73946	transcription start site region 73946	1550 bp downstream
Tssr73947	transcription start site region 73947	1693 bp downstream
Tssr73948	transcription start site region 73948	1718 bp downstream
Tssr73949	transcription start site region 73949	1754 bp downstream
Tssr73950	transcription start site region 73950	1803 bp downstream