rs237939030 SNP Detail

Summary

• ID
  rs237939030
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:84085290 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGGAGTGG CGAGAAGCAG
  AATCCTATAA CCTGGCTCAG CCCCGAAGCA TGACCTTTGG CCGGTCTGTG CCCAAATTGC
  TGACAGATCA TGGTTCCTCT CTTGTCTGGG TCCTAGAGAC GCACTAGGTC GGCTCCACAG
  CAGGCCAGGC TCCGCTCCGG ACTCGCGTGG CGCTCCCCGA GGCCTCCAGC TCCTAATGGC
  R
  GCGACACTGA GCGTGGAGCC CACGGGCCGC AGCTGCTGGG ACGAGCCGCT GAGCATCGCC
  GTGCGCGGCC TGGCCCCCGA GCAGCCCGTC ACGCTGCGCT CTGTCCTGCG CGACGAGAAG
  GGCGCGCTCT TCCGAGCCCA CGCGCGCTAC CGCGCGGACT CCCACGGCGA GCTGGACCTG
  GCGCGCGTGC CCGCGCTGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324114929	CHEV_12_85379466	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237939030					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:84085290 () rs orientation: forward

Symbol	Name	Function Class
4732463B04Rik	RIKEN cDNA 4732463B04 gene	within coordinates
Acot4	acyl-CoA thioesterase 4	within coordinates
Cpgi4854	CpG island 4854	within coordinates
Gm40474	predicted gene, 40474	within coordinates
Gm49366	predicted gene, 49366	within coordinates
Rr265659	regulatory region 265659	within coordinates
Tssr114309	transcription start site region 114309	137 bp downstream
Tssr114310	transcription start site region 114310	81 bp downstream