rs237941432 SNP Detail

Summary

• ID
  rs237941432
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:73754140 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAACCTTAA AGATGGTTAA
  TATATATTAT TAGTCCATTG CTGATAGTCT TTGATTGACA GCTCCCTAGC TCCTACCCTC
  AGCCCTGGCA TCCATCCTTT GCTCCTGGGA GTTCTTTAGA TTTGATTTTC TATGCCTGGT
  TTATTTCACT TAATCTTCTC CAGATCCATC TGTGTTGCCA CACATGCCAG GGTTTCCTCC
  Y
  GTCTTAAGGT TGAACGATGG CTCATTGTGT ATCCACCCCA CATTTTCTGG GTCCATCCAT
  CCATATCTCT GTCCATCCAG CCATACGATG ATAATGTTGC CGTGAACAGG GCGTGCAGTT
  CTCTTTTCAA TCATCTTGCT TCTGACTTCA GACTTCTTGG ATATAAACCG AGCTTGTGGA
  ACTGTTGGTT GGATCATACG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324098773	CHEV_12_74808353	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237941432					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:73754140 () rs orientation: forward

Symbol	Name	Function Class
Prkch	protein kinase C, eta	within coordinates
Rr257347	regulatory region 257347	1540 bp distal
Rr257348	regulatory region 257348	1261 bp proximal
Rr268127	regulatory region 268127	1491 bp distal
Rr268128	regulatory region 268128	862 bp proximal