rs238026106 SNP Detail

Summary

• ID
  rs238026106
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3187045 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              TATCTGTCTG CTTACAGCTT
  CCTGTGCCCA CATTCTTTGG TTTCTGTCCA GGGTTGCAGC TGGGGATTAC TCAGCTTCTG
  ATGACCTTGC CCCTGAGGAA TCTGCAGACA ATGAATTTAG AAGCCTGGAG CTCCTGCTTG
  CTCTGTAGAT CACCCCACCT AGCCTGTGCA GTGCACTCCC TTACCCTGCC ACCACACCCT
  C
  CCTCTCCTCA CTCACCCCGC CCACCTGCCA GCCATCCAGC CAATCAGTTC CTGGCACTTC
  CCTTCTTTTT CCCACTCTTT TCCCTTTCCT GTACTTTTCT TCCTGCCCTT CTCAGTTCCC
  TGGCCTCAGG AGCTTCACAT GCTAGGGCAC AAAAGACACG TGCAGCTGAG TTCCTTCCTG
  CCCCACTCTG CAAAGCACTG                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S5/SvEvBrd	C57BL/6J	C57BR/cdJ	FVB/NJ	LEWES/EiJ	LG/J	SM/J
ss379340335	MGP_WTSI_10_7109496	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S5/SvEvBrd	C57BL/6J	C57BR/cdJ	FVB/NJ	LEWES/EiJ	LG/J	SM/J
rs238026106					SNP	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss379340335	MGP_WTSI_10_7109496	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3187045 () rs orientation: reverse

Symbol	Name	Function Class
Rr230143	regulatory region 230143	1395 bp proximal