rs238094335 SNP Detail

Summary

• ID
  rs238094335
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:129842099 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGGAGGGA GAGAGAGAGA
  GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAAAGCATAA AGTTGGCTGG ATAGGGAGGT
  TGGGATGATT TGTGAGGAAT TGGCAATGGA AAATATATTA TCAAAATATT TTGAATAAAA
  TGTTTTTAAA TAAAATTATC TCATTTTAAA AATTATTTGC CTTGGGCTGG TCAGATGGCT
  Y
  AGCAGTTAAG AGCAGTGGCT GTTCTTTCAG AGGTCCTGTG TTCAAATCCC AGCTACCACA
  TGGTGATCCA CAACCGTCTA TAGGAGGATC TGATGCCCTC TTCAGACAAG CAGATATACA
  TGCATCAGAA CATTCAGATA TTAAATAAAT TAAAATCTTT TAAAAATTAT TTGCCTCATT
  TATTGGATAA TAGGAATTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323543569	CHEV_10_129443286	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238094335					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:129842099 () rs orientation: forward

Symbol	Name	Function Class
Rr385497	regulatory region 385497	80 bp downstream
Tssr96487	transcription start site region 96487	1869 bp downstream