rs238101493 SNP Detail

Summary

• ID
  rs238101493
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:55421227 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGACCACTC CCACCTCCTT CTCATTCTGG
  TGCCCCTGAG AGCAGTCAAT GTGGCGTGGC GATACCCTAC GCAACCTTCA CAGCCTCAGT
  CACTGGCCAG AAGGGGACTT TCAGGTGCCC AGGCCCAGGG TAGGCATCTT TGCGCCGTTG
  K
  TGAGTTACAG ATGGCTAGCC GTGATTGCGG CACGCTATAC ACCGGGACCC GCAAATGTGC
  gattctgtgg gttttcttgt ggtgtctttg tctcgtttgg tttctaggat agtcctcctc
  ctcttctgaa ggattcctca agctttgcct                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319728295	CHEV_1_55438912	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238101493					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:55421227 () rs orientation: forward

Symbol	Name	Function Class
Cpgi265	CpG island 265	within coordinates
Gm8531	predicted gene 8531	within coordinates
Rr16609	regulatory region 16609	974 bp proximal
Rr33932	regulatory region 33932	981 bp proximal