rs238116712 SNP Detail

Summary

• ID
  rs238116712
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:33790294 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAACTTAAC CAAGCCATCC ATGTCAGCAG
  AGCCCAGTTG CTTCCATGGT GAGAGCTGGA AGGGTGGGTG GTCCTAGGCA AGCTCACAAA
  TGTTATGGTT TAGTGTGTGC TACAATTGTA TCTGCCTTAT TCCTTACTAC ACCCTTCTAG
  R
  GATGGTTCTG AGACTCAGGC AGAGCTTCAT CACCTCCATA CTATACAGCC TCTCATTTAG
  GTTCTGTTCT GAGGCTCAGC CCTTTAGAAT CTCCACATTC CTAGCTATGC TGGAGAAGTG
  AGCCGGCCCT TTTCCCTTCA TCTTTCCTTC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320223700	CHEV_2_33755802	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238116712					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:33790294 () rs orientation: forward

Symbol	Name	Function Class
D2Mit203	DNA segment, Chr 2, Massachusetts Institute of Technology 203	180 bp distal
Gm39792	predicted gene, 39792	within coordinates