rs238119387 SNP Detail

Summary

• ID
  rs238119387
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:174037254 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCC TGTATATTTT TAAATATCCT
  K
  AGGCAGCACA ATAGCTGGGC AGCTG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320138493	CHEV_1_176139819	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238119387					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:174037254 () rs orientation: forward

Symbol	Name	Function Class
Gm71183	predicted gene, 71183	within coordinates
Spta1	spectrin alpha, erythrocytic 1	within coordinates
Tssr10306	transcription start site region 10306	1966 bp upstream