rs238146238 SNP Detail

Summary

• ID
  rs238146238
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:59528252 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTGTGGTT GGCTACAGTG
  GCTGGGGATA CAGGTTAGGC TAAGTGGGGT GTGGCCAGAC CCTTTTGCTC TCAGGAAACA
  TCTCGTACTT TTGCTGAGCA TTGGCCTTCT GGGAATATAG ACAAGAAGGC ATCACACAGA
  ATGTAGCCTT GTAGACCAAG GCTTGGGAAA TGTTTCTGTT TATATGGAAC AGGAAGTTGG
  R
  AAAAAATACT ATGGACTCTT TTTTTTTTTC TTTAATACTA GGGCCATCTC TCCCTTTTGT
  GGGACAGCAA CTCATTATCT CCCTTTAATG TCTTGCTATG CACTGTCTCT TTCGATGTTT
  ATTTCCACTT TTTATTAATT TTTATTTTTT TTTTTCAGAC AAGATCTCAT CTTCCTACCC
  AGGCTGATTT TACCCCGTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323698889	CHEV_11_59450928	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238146238					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:59528252 () rs orientation: forward

Symbol	Name	Function Class
A630028G03Rik	RIKEN cDNA A630028G03 gene	within coordinates
Gm33998	predicted gene, 33998	within coordinates
Rr448219	regulatory region 448219	969 bp distal
Rr448220	regulatory region 448220	95 bp distal
Rr448221	regulatory region 448221	1051 bp proximal