rs238155959 SNP Detail

Summary

• ID
  rs238155959
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127723564 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGCTCAGAG TCACCTCGAT CATGCCCAAC
  AGGTTCACAT CCAGTATATT TGCAAAGTCC TCTTTTTTCA GCCACTCATT GATAGCAAAG
  ACACAGATGC CAGCATTGTT GACCAGGCCC CAGAGTCCTG GAAAAAGCGG AAAGAAGAAA
  R
  AATCACAGGT CTAGTTTTCA CTAAAATCCA CATTCCACCG GGTAAACTGA GACCATTCAG
  ACAGGCATTG GATGGAGAGT GGGGGATAAA AAACAGCATA TTGTCAGCAG GGTTGGTGCA
  TCCCATCCCG GAAGAAATGG CTCACAGCAC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323530330	CHEV_10_127324751	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238155959					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127723564 () rs orientation: forward

Symbol	Name	Function Class
Rdh7	retinol dehydrogenase 7	within coordinates
Rr226506	regulatory region 226506	420 bp distal
Rr226507	regulatory region 226507	828 bp proximal
Rr226508	regulatory region 226508	1838 bp proximal
Tssr99826	transcription start site region 99826	949 bp downstream
Tssr99827	transcription start site region 99827	993 bp downstream