rs238215291 SNP Detail

Summary

• ID
  rs238215291
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:51743748 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aaatgtaaa taaagaaaaa atATATATAG
  AATGTGGCTT GTCTCCCAAT GGAGCATAAG GCTATATTCA AAAAGATGAT GCCAGGCAAG
  AGGCACCTGT CCTGGGCAGC CTGTGTAGGA CAGTGCTCTC CTTTGGAGAC TGCTGTGGTT
  Y
  GGTTCGGACT TGCCTTGTTC TTTCTTTTTC CTTGTATTAA CGATCAACTC CAGACTCTCA
  CATATGTAAG ACACACTACT GAGGCCATAC CTTCAACCCC TTGAAAAGAT ATAACAGCAT
  ATTTTAATCA CCTTTAATTG TGCCTTTCTA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324037239	CHEV_12_52797952	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238215291					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:51743748 () rs orientation: forward

Symbol	Name	Function Class
Ap4s1	adaptor-related protein complex AP-4, sigma 1	within coordinates
Rr256575	regulatory region 256575	1348 bp distal