rs238304176 SNP Detail

Summary

• ID
  rs238304176
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:80072176 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAGG ATCGGATGTG TGTAAAGTGT
  R
  GGAACTGCTC CTTTTAATTT TAGGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323761708	CHEV_11_79994852	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238304176					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:80072176 () rs orientation: forward

Symbol	Name	Function Class
D11Bhm113	DNA segment, Chr 11, Boehm 113	277 bp distal
Rr386348	regulatory region 386348	within coordinates
Rr452448	regulatory region 452448	1499 bp distal
Rr452449	regulatory region 452449	213 bp proximal
Tssr103508	transcription start site region 103508	1982 bp downstream