rs238307541 SNP Detail

Summary

• ID
  rs238307541
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:64735570 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCATACCT AGTAACATAA
  GTTTGTTTAA TAGAAAGGAG ATACTTTGTC TAGGGCTGGG ATGGTCATCA GGATGTTTAG
  AAGAGTCATC TATGGGTTAA CAAGGTGGGG TAAACGTGCC TTCTTACCAA GCCAGCTGAC
  CTGAGTCCAG TACCCAGGGA CCACATGGTG GAAGGAGAGA ACTGACTTCT ACTCGTTGTT
  R
  TCAGAGCTCC AGGTGGGTGA GGGGACACGA GCATGCTCCC ACACTACACA GAGAAATAAA
  ATGTAGGGGT CTTGTTTGGT TTTGTTTTGA AACTAAGCTG GTCTGAGTAG GCTGCAGTGG
  CAAGAGACCT GGGAAAAGCA ATGTCAGGCC CGGCTCTGTT ACTGATGGTT TGTGCTGCTG
  TCCACGAGTC AGATTAGCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322985949	CHEV_9_64676095	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238307541					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:64735570 () rs orientation: forward

Symbol	Name	Function Class
Dennd4a	DENN domain containing 4A	within coordinates
Rr201294	regulatory region 201294	1170 bp distal
Rr210200	regulatory region 210200	within coordinates
Tssr2912	transcription start site region 2912	1832 bp downstream