rs238317756 SNP Detail

Summary

• ID
  rs238317756
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:70353524 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGTC ATCCTGGTAC TATGAAGGCA
  G
  AGAGTTGGGG TGTTCATAAT TTCAG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322697760	CHEV_8_72424773	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238317756					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:70353524 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20428	CpG island 20428	521 bp proximal
Ndufa13	NADH:ubiquinone oxidoreductase subunit A13	Intron
Rr400887	regulatory region 400887	657 bp upstream
Rr664594	regulatory region 664594	1618 bp distal
Rr664595	regulatory region 664595	820 bp proximal
Rr664596	regulatory region 664596	1674 bp proximal
Rr664597	regulatory region 664597	1814 bp proximal
Rr664598	regulatory region 664598	1933 bp proximal
Tssk6	testis-specific serine kinase 6	1310 bp upstream
Tssr2594	transcription start site region 2594	894 bp upstream
Tssr77689	transcription start site region 77689	1304 bp upstream
Tssr81543	transcription start site region 81543	260 bp downstream
Tssr81544	transcription start site region 81544	758 bp downstream
Tssr81545	transcription start site region 81545	787 bp downstream
Tssr81546	transcription start site region 81546	1111 bp downstream
Tssr81547	transcription start site region 81547	1141 bp downstream