rs238347642 SNP Detail

Summary

• ID
  rs238347642
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:117708555 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTAATCAGT GAAATAAAAA
  TCTGAGGGCA AAATGGAACC TGGTGATGTT AAAAGTTTCC CCGGGTAATT CTAGTTGTGC
  GGACAGAGAT GAGCAGCATC TCTATAGACT GAATTGTTAT GTATGCAAAT TGTGTTTCCA
  TGGAGCGGCC ATTTCTCCAG AGTCTTTTTT TTTTTCTTTT TTCCTAATTC TTCCTTAATC
  Y
  GAAGAGATGG AATGACTGGG AAGGTAAATG AGAGCGACTT CCAGCCCAAT TAGCACAGGT
  GCAAATTAGC CTGCTCACAG TGTTTTCTGG CAGGTCACCC CTTTCTTTCC CACCCCCTTT
  GCTTTCTGGT GACGTGACAG TGACAGCACT TTCTCCTTGC TGCAGTAAGA CTTTGATGTG
  ACAAGTCCCA GCTGAGGTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323215326	CHEV_9_117788605	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238347642					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:117708555 () rs orientation: forward

Symbol	Name	Function Class
Gm26614	predicted gene, 26614	within coordinates
Gm50606	predicted gene, 50606	within coordinates