rs238384386 SNP Detail

Summary

• ID
  rs238384386
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13723664 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTCACTTC TGTACAGCCT CATTTCACTG
  GCTCCTCCTG CTTCTGGTGA GATTCTGTTG TCAGTAGAAA GGCAAGGGAA GCTCTCAGGG
  AAAGCACTGA GGGAGAGCAC TGACTGATAG CACTGACAGA CAGCACCACA GCACTGAGGG
  R
  GAGCACTGAG GGGGAGAACT GACAGACAGC ACTGACAGAC AGCACTAAGA GAGGGTACTA
  AGGGAGAGCA CTGAGGGAGA ACACTGACAG ACAGCACTGA GGGAGAGCAC TGATAGACAG
  AACTGAGGGA GGGTACTGAG GGAGAGCACT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322508967	CHEV_8_13673664	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238384386					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13723664 () rs orientation: forward

Symbol	Name	Function Class
4930442M18Rik	RIKEN cDNA 4930442M18 gene	within coordinates
Rasa3	RAS p21 protein activator 3	within coordinates
Rr400766	regulatory region 400766	982 bp upstream
Rr659980	regulatory region 659980	1692 bp distal
Rr659981	regulatory region 659981	657 bp distal
Rr659982	regulatory region 659982	322 bp distal
Rr659983	regulatory region 659983	1145 bp proximal
Tssr76418	transcription start site region 76418	825 bp upstream