rs238419705 SNP Detail

Summary

• ID
  rs238419705
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:79517562 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTCTCTCT CTTTTGCTTT
  GCTATTCTTT TTTCTTCTTC TTCATTTTAT TTTTTTTATT TAATCTTTTC TTACAGTCCA
  GGTATTATTC CCCTCCTGGT CCACTCTATG ACTTTTCGAC ATCCCATACC TCCCATCCTC
  AGTCTCCATG AAGGTGTTCC CACCACCACA CCACCAGATC TCCCTACTCC CTGGGGCCTC
  M
  AGTTTCTTGA GGATTAGATG CATCTTATTT CACTGAGGCC AGACCAGGTA GTCCTCTGCT
  GTATATGTGT TGGGGACCTC CTATCAGCTA GTGTATGATG CCTGGTTACT GGCTCAGTGT
  CTGAGAGATC TCATGGGTCT AGGTTAGTTG GGACTTCTGG TCTTCCTATA GTGTCACCCT
  CCTCCTTAAC CTCTTCCAGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321835106	CHEV_6_79490573	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238419705					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:79517562 () rs orientation: forward

Symbol	Name	Function Class
Gm6261	predicted gene 6261	629 bp upstream