rs238586387 SNP Detail

Summary

• ID
  rs238586387
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:53897938 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCCTCATTT GCAGTCTGCT AGACTAAATA
  ACCCCCTTTA AGTTACCATT ATTTATGACA TTTTGTTCCA CTACTTAGAC TGTAAAAACT
  GCAGTTCAAA CTAATTTGTG TGAATTCTCA GGAGACATAC TTACACTCCC TCCCTTTGTT
  R
  CTTTCTCTAA ATTTTGCCCT TCTAAATCAT GCGGGACTTT TAACAGCGCT GGCTCCTCTT
  CATCATCAAA CTAACTGCCT CTCGAAGCTT GACACATTCC TGTGGCTGTG CCTTTTACCT
  GTGTGATGAC TCAAATCTAA TCCAAGATTT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320770182	CHEV_3_53794439	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238586387					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:53897938 () rs orientation: forward

Symbol	Name	Function Class
Rr576763	regulatory region 576763	1747 bp distal