rs238596976 SNP Detail

Summary

• ID
  rs238596976
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:76792282 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTCCATCG ATTATTTCTA
  TTATTTTGTC AATCATTTAG TCCTGGTGTC GGCATGACAA CAGCAAAGAT AAAAGTCTAC
  TCAAATACTG TCATCCTCAC ATCCAGGAAA ATCAATTGCT GCAGAGCGAC ATGGCTGCAT
  GTAAGCCCGA GATAAAAAGA GAGTTCCCGA TCAAAGAATG AGCACCCGAA TTTACTTAGG
  R
  CTCACGGGGG ATAGCTTTAT TCAATCTATT AGAAAAATAG CTCTCTTAAA GCACATGAAG
  GAAAACATTG TGATTGAAAT GAAAGCGTTA TCATGTTTGG AATCAAGAGA ACAACCTTTC
  ACACTGAAGT TCAATTTGCT TTCATCTTTG CTGGGAGTTA AAGCAAAGAC AAAGACAAAT
  AATATTTCCT TCTTCCTATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320356632	CHEV_2_76799995	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238596976					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:76792282 () rs orientation: forward

Symbol	Name	Function Class
D2Ucl5	DNA segment, Chr 2, University College London 5	1982 bp proximal
Tssr24818	transcription start site region 24818	227 bp upstream
Ttn	titin	within coordinates