rs238622014 SNP Detail

Summary

• ID
  rs238622014
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135107929 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tgttttgag acaggatctc actattatat
  agccctggct ggcctggaac tcactatgca gagcagtctg acctcagact gacaggagat
  ctacctgctt ctgtttcctg agggctgaga cttgagactg ggcgacacca tgaccagcAG
  Y
  AGGCAGTATT TCACTGCCTC CTAGAACTTT GGCAAGAGGA TCTGGCagcc cggtgtggtg
  gcacacgccc ttaatcccag cacttggaag gcagaggcag gcaaatttct gagttcaagg
  ccaccctggt ctacagagtg agttccagga                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319988326	CHEV_1_137076768	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238622014					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135107929 () rs orientation: forward

Symbol	Name	Function Class
Rr419094	regulatory region 419094	260 bp distal
Rr419095	regulatory region 419095	471 bp proximal
Tssr13831	transcription start site region 13831	695 bp downstream