rs238657791 SNP Detail

Summary

• ID
  rs238657791
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:134096021 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AATGCACGCA CACACACACA GACACACACA CAGAGACACA
  CACAGACACA CACACAGACA CACACACACA CACACACACA CACACACAAA CACACACACA
  S
  GCATCTTTAA CTTTGACAAA ACATATTCTT TGAAAACTTC ATTTTCTGTA TTTTTATTTT
  TATCGTATTT CCTCCCACTC TTCTCCCAAT TACTTCCAA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321976674	CHEV_6_134069076	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238657791					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:134096021 () rs orientation: forward

Symbol	Name	Function Class
D6Mit374a	DNA segment, Chr 6, Massachusetts Institute of Technology 374a	392 bp proximal
D6Mit374b	DNA segment, Chr 6, Massachusetts Institute of Technology 374b	426 bp proximal
Etv6	ets variant 6	Intron
Rr639573	regulatory region 639573	122 bp proximal
Rr639574	regulatory region 639574	1480 bp proximal