rs238673784 SNP Detail

Summary

• ID
  rs238673784
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:107438403 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTTTTGGG GCTCTCAAAT
  GCTGGAAAAT GTTTGTGAAG TACCTGGTGG CTGATTCTAG GCTCTTGACT TTCCTACTGT
  TTATGAGCTC CAGAGGCTGC CTTGAACGGG TGTCTGAGGT CCTACCAAAC TGTCTTCACT
  TTGCTTTCTT TGGTACCAGA GACCTCTGCT GGCCTCAAAG AGATTTGTAG TATATAGACC
  R
  GACAGGTTCT CCCACACTCC CAGATCATAA GCCCCTGGAG TGGCTAATAT CATAGCTAGG
  AGTGTTTTCC ACATGATTTG GGGATCTATA AGCCATCACA GTATTGGGCT TCGTATATTC
  AGGGATATGT TTTCATGCTT TCAAGATCTC TTATGTGTTA ATTATCCTTA TGCAGCAGTG
  CAGCTGTGGG TATCCCAGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322381900	CHEV_7_114982710	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238673784					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:107438403 () rs orientation: forward

Symbol	Name	Function Class
Gm5002	predicted gene 5002	1315 bp downstream
Rr163004	regulatory region 163004	1793 bp distal
Rr381269	regulatory region 381269	1157 bp upstream