rs238687099 SNP Detail

Summary

• ID
  rs238687099
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:106528841 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTC TCTCTCTCTC TCTCTCTCTC
  W
  GTGTGTGTGT GTGTGTGTGT GTTTA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323186550	CHEV_9_106553973	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238687099					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:106528841 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22272	CpG island 22272	454 bp distal
Grm2	glutamate receptor, metabotropic 2	within coordinates
Rr686377	regulatory region 686377	1262 bp proximal