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rs238710872 SNP Detail
Summary
  • ID
    rs238710872
  • Variation Type
    SNP
  • Alleles
    C/G
Genome Location and Flanking Sequence
  • Location
    Chr9:30401294 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                      taaacagtg tataccgtgt acaaagcata
    tatgtaattt tcattttcat tcgatataag tatgaaaaca gACCTCATTC TTTTTGCTGC
    CAGACTGCTA CCAGCAGTCT CATGGCTGCT TCCAGAAAAG ATCTGTTCCA CTCAGTGCTG
    S
    CCTACTGATG TAACAAAAGC CCCACCTGGC TAAAGTTGAC ATCTGAAGAA GTAGATTTAC
    AAACTGGTCA AGAAAGGGAC TCCTTCCCAA ATAGGTGTGA TCCTGAGGGA CTCACATGGT
    GTGCCACAGG TTGTTTAGTG ACGGGCAATA                                 
    
    S = C/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss322887547 CHEV_9_30297583 CHEVERUD SCREENING_POP f SNP G C
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs238710872 SNP G C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr9:30401294 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm47714 predicted gene, 47714 within coordinates

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory