rs238716491 SNP Detail

Summary

• ID
  rs238716491
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:103213112 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAACTAGA TCCTGAAGCA
  AGAGGTCACT AATCTCTTCA GTAGAGATTT TATAGCAGCG GAAGGAAGAG CAGCAGATGT
  TAGGAGGATG ATAGTTTTCC TTGTCACCTG GAACTCACCA GTTAGGCCAA GCTGGCTAGC
  CAGCAAGCCA CAGGGGTCAT CTTCCTCTCT GCTTCCAGAT CTGACTCCCA CTGTGCCTGG
  M
  TTTTTAAGTA TGTACTGGGG GCCAGGTTCT CAAGCCCCTC CCACTGAGCC CTCTCTCTTA
  ACCCTATGGA AGTCCATTTG ATCCGGGTGC ATTGTTTTCT TTTAAAAGAT TATTATTTAA
  AGTTTGAGTG TTTGTCTGTA TCACATGCAT GGTGTGCCTG CACAATCCAG AACTGGGAAT
  CAGATTACCT GGAACTAAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320856883	CHEV_3_103109719	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238716491					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:103213112 () rs orientation: forward

Symbol	Name	Function Class
Rr69850	regulatory region 69850	within coordinates
Trim33	tripartite motif-containing 33	within coordinates