rs238757933 SNP Detail

Summary

• ID
  rs238757933
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:54866578 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTATACAG CTTATTCTCA
  CTTTGGGGCC TTTTAGCAAA AATCAAATAT ATATAGTGTG TTCATCTGTT CATACCTGTT
  TTATGCATGT TTCTGCTTAA AAAGACATCC TTTGTTGCTT GTTTTGTTTT CTAAGAGCTT
  TTCTGTGTAG CCCAGGCTAG CCTGGAGCTC ACAATCCTGC TTCAGTTTTT AAGTCCTGAG
  M
  TAACAGCAGG TGTGTGCAGT GTACACAGTT GTAGCAGCTC CAACCAACGG CATTAGGGGT
  ACATTTCTTT CTCAAGACAC ATCATAGCTT TCCTATGCTT AGGAATAGTG ACTAGCAAAC
  ACTATGCCTG AAGATCATTT TTTTTTCCAA CTGAAATTCA GCAACAGCAC TTGTGCATGA
  AAACGAAGAT GCAAGATAGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322966284	CHEV_9_54807101	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238757933					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:54866578 () rs orientation: forward

Symbol	Name	Function Class
Psma4	proteasome subunit alpha 4	1264 bp downstream
Rr204186	regulatory region 204186	1217 bp proximal
Rr209620	regulatory region 209620	1623 bp proximal