rs238770307 SNP Detail

Summary

• ID
  rs238770307
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97744154 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACTATATTC CCTCCAGTTT CTGGAACCCC
  ACATTCTAAG CAACTACAAG CATTTCTCAG ACAGCCTGAG CATCGCCAAG CAGACCAGAA
  GAGCCTTAAA GAGGCTATTA AAGCAAGAAA GCTGACTGCC ATCTTTTATT GAGCAAGTGG
  K
  TGTTCTTCTG CAGGTGAGGA ACTTCATGAT CTTCTTATTT TTGCAAACTT TTATAataaa
  actcaatact aatctccata tttgatagat gaagaaactg agcatgcaat gagctgggta
  aattgcctaT TGCAAAATAT ACTTAAGACT                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323123510	CHEV_9_97762520	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238770307					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97744154 () rs orientation: forward

Symbol	Name	Function Class
Clstn2	calsyntenin 2	within coordinates
Rr198247	regulatory region 198247	1647 bp proximal
Rr205510	regulatory region 205510	1607 bp proximal