rs238810530 SNP Detail

Summary

• ID
  rs238810530
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:56498509 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGAGGTGCT CAGGAGCCCA
  TCAGCTCTAA GAAGGCAAAC TGAGTTATTC AGCTCATACT GCAATGCTAA CCCTGGTTGA
  AATGTGCTTG ACTCCTTATC AGTGACTCTG GTGACAGTCT GTTTCCCCCT CATGAGACTT
  GCTAGACCCT CTCTCCTCCC AAGCACCTTA GGATGAAGGC GGAGCCTCCA TGGAATCTTT
  Y
  TAGGCAGGTA TGGACTGGTT TTTTTGCTCC TCACCTTCCT TCACAGTGAG CAGCAGTCAG
  CACAAAGTCC TCTCGAATAA GGAAGCCCCC ACATATCGCC TCAGGCTGCT GATCCTTGAT
  CGAAAGTAAG GCCATGTAGG GTCGAGAGTG GGGCTTGACT TCATGTCCCC CGATGATCTC
  CCCTGAAGGG AAAGCCAATC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324645024	CHEV_14_56879889	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238810530					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:56498509 () rs orientation: forward

Symbol	Name	Function Class
Gzmb	granzyme B	within coordinates
Tssr128924	transcription start site region 128924	1120 bp downstream
Tssr128925	transcription start site region 128925	1165 bp downstream
Tssr128926	transcription start site region 128926	1181 bp downstream