rs238810986 SNP Detail

Summary

• ID
  rs238810986
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97869319 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCAAACTAA CTCTGGCAAC
  CCCTTATACC CTTCTAGCTC CTTATTCTCT GGATCATTCT GTAGTCACCT GTGTCTAGCT
  TGTTCTCTAT TCAACCTGTC TCTGTAAAAC TCTCCTGGTA AAACTGTCTT CTTTCTCTTC
  TACACATCCT CTTAAGTAGC TTCCCTTTCC TCTCTCTATT CTCGTGAGAG TTGGGCATAT
  M
  TTCTCCTTTC AAATCTTAGT CTGATTCATC TCTTTGTCTG CCACTCAATT AAACTTAAAT
  TGCAAACATG GGTGCTTTCT ACAAACTAAC TTTTCCTTCA CTGTTTGGTA TAAAGGTGTA
  TATTAAGAGT GTGTCTGTTA GCAAGAATTT TATTGAGGAT TTTTGCATCG ATATTCATAA
  GAGAATTGGT CTGAAGTTCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323124738	CHEV_9_97887685	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238810986					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97869319 () rs orientation: forward

Symbol	Name	Function Class
Clstn2	calsyntenin 2	within coordinates
Rr205512	regulatory region 205512	1060 bp proximal