rs238832786 SNP Detail

Summary

• ID
  rs238832786
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:97444307 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTATTAGG TAATTATCTA
  TATAAACTGG ACATACAGAA TAATTCTAAG GAATAATTTT CTAAATTGTA CAATAAAATA
  GAAGAGCCTT AAGAACATGG TCAGGAAGGA AAACACATGA AATGCCAACT ATTACATGAT
  TGTGTTTATG TGCTATAATC AGAAAAGGTA GATACACTGA GATAAAAAGG AAACTTACAG
  Y
  TATCAGGTAT TGGGTTGAGA TGCAGATTAA CTCTAAACAC TGTCCAGTAG TGAGAGAGGT
  CTAAATGTGA TTTATGGCAG TGGCTAATAG TGTCTAGTAA ACTTACTAAA ACCCACTGAA
  TTGGAGACTT AATACCATCA ATTTTACGGT GTATAAAATT TACCTCAGTG AGGTGGTTTA
  AAACAAATAC CACATGAGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324130773	CHEV_12_98716258	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238832786					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:97444307 () rs orientation: forward

Symbol	Name	Function Class
Rr387670	regulatory region 387670	1534 bp upstream
Rr470847	regulatory region 470847	856 bp distal