rs238835354 SNP Detail

Summary

• ID
  rs238835354
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97023458 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGGATTAA GTCTTTGTTT
  TAGTTCTAGC CTGTGGTGTT TTCTACATTC CCAGTTTTAT GGCCTGAATG GTACTTATTG
  ATAGATGATT TCTCCTCGGG TGAAATGGGC CAATTCAAGA CAGATTAGAT TATATCAAAG
  GCAGGTTTAT TGGGAATCTG CTCTCAGGTG AGTTCACTGG CCCCAAGGAT TGAGGCCAGG
  R
  GAGTTGCCAT GGGGAGAGAA GGGGAGGGAG AGAGGAAAGA GAAAGAGAGA AAGGGTGAGA
  TCTCAGAGAG AGAAGAAAAG GAGGAGGAGA GACCAAAAAA CGTCTGGATT ATATAGGGAG
  GAGCCTCTGG GGGAAGGGCA GCCCAGCCCC TGGGCTGGAG AAGTCAAGGT TGGAGACAGA
  GTATGATGTG TAGGGACTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323116085	CHEV_9_97041824	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238835354					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97023458 () rs orientation: forward

Symbol	Name	Function Class
Gm57041	predicted gene, 57041	within coordinates
Rr685156	regulatory region 685156	444 bp distal
Tssr86631	transcription start site region 86631	266 bp downstream