rs238835798 SNP Detail

Summary

• ID
  rs238835798
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:11502840 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTATATGGT AGAAAAGAAG
  TATCTAAAAG TCTGTTTTAT CAAATGGAAC TACAACACTC ATAGGAAATT TAGATAGGTA
  GGTAGACAGA CAGACAGACA GACAGACTGA CTGACTCACT GACTGACTGA CTGACTCACT
  GACTGACTGA CTGATATGGG ACAGCCATAT ATTTACAGGC CAAAAGAAAA AAATAAAGAA
  R
  GATGGTCAAC TGGAACTACA ACCGATACTA CATGTAAAAA TTAAATATAC AGGCTTAGAT
  ATATGAGCTA AACCTACTAA AGCAGAAAGC AGGATACAGG TTCATGATTA TTGAGTGGGT
  AATGGTGTCT TAGAAAAGGC ACCAAACAAC ATAACTGTTG CGCAACAACA AAAAATATAT
  ATCAAAAGAC ATCAAATTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324264575	CHEV_13_11580221	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238835798					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:11502840 () rs orientation: forward

Symbol	Name	Function Class
D13Ertd463e	DNA segment, Chr 13, ERATO Doi 463, expressed	within coordinates
Rr387978	regulatory region 387978	1831 bp upstream