rs238887094 SNP Detail

Summary

• ID
  rs238887094
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr16:28721473 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTAGTGCT GCGTAACAGG CAGGAAGCAG
  TTCTTCTCCC ACACCTGGCA CGATCCAGGC CCTTAAAAGA TAATTATATA TGTTTCTAGA
  AAATTAGAAA TATTTGCGAG TTGAGATAAG AGCAATAAAT ATGATTAAGG GGAACAAAAA
  M
  CAGTTCTGGG TGAGAAATAA AATTATCCTA GCAAGGGTTA GATTAGACTA GAGGCACCCT
  TGGGACTGTC TGCACATTAA GAGTGTGACT GCAATCATAG GCTCCACTCC ATTGTTCACA
  AGAAACCATG CACAACCAAG AGGCCTTGAC                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325126488	CHEV_16_28902807	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238887094					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:28721473 () rs orientation: forward

Symbol	Name	Function Class
Mb21d2	Mab-21 domain containing 2	Intron
Tssr140667	transcription start site region 140667	106 bp upstream