rs238889505 SNP Detail

Summary

• ID
  rs238889505
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:72617949 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCCCCCGG TCCAGGCTGC
  ATGGAGGATG GAGGTCTTGG TGACAGGAGT CTGTACAAAG AAACAGAAAT GAGCATTTGG
  AACAGATTAT ATTGTTGACA TTGGTGGGCA GATCTGTTAG CAGATTTGGA GAAATATAAT
  GATTCGTACA ATGAAGCAAG TGAAAACTGA AGATGACTCC ATAAGAAGAG AACAAGTTGT
  R
  TGCGTGTCCT AGTTTGCTTT CCATTGCTGT GGCAAACATC ACGACTAGAC ACAGCGTGTG
  CAGAGAGGGT CTGTTTCATC TTACAGTTGT GGTCCATCAT GAGAGGAAGC CAGGGCAGGA
  GCCTAAAGGC AGGAACTAAA GCAGAGAGCA TGGAGGATGC TCACTCAGCC GGCTGTCTTA
  CACTATCCAG ACTACCTGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320343731	CHEV_2_72625662	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238889505					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:72617949 () rs orientation: forward

Symbol	Name	Function Class
6430710C18Rik	RIKEN cDNA 6430710C18 gene	within coordinates
Rr559035	regulatory region 559035	1325 bp distal