rs238895434 SNP Detail

Summary

• ID
  rs238895434
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13264002 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCATGGAAG GCCCAACCCC
  TGCCACAACC ATACCAGTAG GCATTGTGCT CAGCAATGTT TTAGTGCTAA ATGCAGTGTC
  CCATTTAGAG TTCTAGGTCT TACCCCATCT CCCTAGAAAC CCAGGCAATG ACCTGTGAAT
  TTGTGTGCCA TGCCTGCCCC TCCCCCATGC TCCATTCACC TCAGTTTTAG TCTGGTAAAG
  Y
  CGCAGGGCCA CGGAGAGTGG CAGCAGCTGG TTGTACTTGC TGGGTTTGCA CAATTGCAGC
  TGTGCCCTGT AGCCCTGCCA ATGCTGCCAT CTGGAGGTTA GCAGTGCCCC CTGGTGGCGC
  CTGAGAATCA AGAGTCACGG GGACCTGGGT ACAGAAAACT GGACAGGCAC ACTGATCCAC
  CACATGACTT CAGGGCCTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505137	CHEV_8_13214002	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238895434					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13264002 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	within coordinates
Rr368495	regulatory region 368495	166 bp downstream
Rr368496	regulatory region 368496	within coordinates
Rr659886	regulatory region 659886	497 bp distal
Rr659887	regulatory region 659887	539 bp distal
Rr659888	regulatory region 659888	31 bp proximal
Rr659889	regulatory region 659889	81 bp proximal