rs238982792 SNP Detail

Summary

• ID
  rs238982792
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:88874799 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACAAAGTGA GTTCCAGGAC
  AGCCAGAGCT ATACCGAGAA ACCCTGTCTC GAAAAACCAA AAAAAAAAAA AAAAAAAAAA
  AAAAAAAAAG TCAGAGAATA CCATTTACAA CTAGAGCTTC AAAGATAACT ATAGTTTGTA
  TTTTTGGGTA TAAATTTGCA AGTATTTTCT GTTACATTTT ACAAATTGAT AATTTATCAC
  Y
  GATAAACAAA TGAGTTCTTT TCACACATAG ATGTGTCAGT TCCTTTGTGA TGGTGCATAT
  AGACTTTTGG GCCAGTGAAA TGGTTCAGCT GGTCAAAGGG TGTGCATGCA AGCCTGATGA
  CTAGAGTTTG ACAGGGACTC ATTATGAGGC TGTGTCTGCT AAGGGTTCCA TCACCATGCA
  AGAACATCAT CCCCAAAACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321602386	CHEV_5_89155965	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238982792					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:88874799 () rs orientation: forward

Symbol	Name	Function Class
Mob1b	MOB kinase activator 1B	Intron
Rr614172	regulatory region 614172	1942 bp distal
Rr614174	regulatory region 614174	965 bp distal