rs239003823 SNP Detail

Summary

• ID
  rs239003823
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152461760 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCGACTCCT GGTAACAACT
  TGTCTTGGGA TTTTTGGTTT GGTTTGGTTT GATTGGCTAC TTTATTTGCA TTTCTAGGTC
  TCCCCTTTGG AAACCCTTCC ATCCCAGCCC CCCTCCCTTG TCTTAGGATT TCTATTACTG
  AAATGATACA CAAGCACTTT GTAGAGGAAA AGGCTTCCTT GGCTTAAACA TCCACATTGT
  W
  GTCCATCACT GCAGGAAGTC AGGGCAGGAA CCCGGAGGCT GGAGTTGATG CAGAGGCCAT
  GAAGGAGTGC TGCTTACTGC CTTGCTCTTT GTGGCTTTGT TCAGCCTGTT TTCTTATAGA
  ATCCAGGACA ACCAGCCCAG GTATGTTACC ACCCACAACG GACGGGGCCC TCCCCCATCA
  AGCTCTTGTT CAGAAAATGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320562574	CHEV_2_152445576	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239003823					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152461760 () rs orientation: forward

Symbol	Name	Function Class
Rr567404	regulatory region 567404	899 bp proximal