rs239037785 SNP Detail

Summary

• ID
  rs239037785
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:5771907 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCAGGGCT ATCTTAAGAG
  AGATTATTTT ATAGCTCTAT CCTATTTTTT GCTACTTAAA AAACTACATC TAAAGAGGCT
  ACAGGCAGGT TCAGATCCCC TCAAAGTGGA GTTATAGACA GTGGTTTGCT GCTATATGGG
  TGCTAGAAAT TGAACTCGGA TCCTATGCAA GAGCACCCAG TACTTTTAAA CATAGAGCCA
  Y
  CTTTTGCTCC ATGCTCTGTG CTATGTAAAT GTAACATAGT TTTAATTGTT AAAAGTGTCA
  ACTGAAGTTA TATTGGTACA ATCAAAAACC ATTTTTATCT TTATCTCTAT ATTAAAAACA
  CAAAACCAAG AAGATGTAAA AATAACTATG TTATGATCTA TTCTGGACTT TGTTCAATAG
  ATAATCATAT AGAGTTTATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324223044	CHEV_13_5721154	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239037785					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:5771907 () rs orientation: forward

Symbol	Name	Function Class
Gm35330	predicted gene, 35330	within coordinates
Rr387902	regulatory region 387902	1943 bp upstream
Rr474521	regulatory region 474521	1580 bp proximal