rs239058660 SNP Detail

Summary

• ID
  rs239058660
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:39007719 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTGCTGCA GCAGGACCGG
  AAGGAATACA TTGATAAGAC TGGAGACAGT ATATTGCCCT GATTCTTCCT TAGTTTATAT
  ATATATATAT ATATTTAAGT ATTTGAGAAT TACATACAAG ACTTTTCCTT TTGCATCATT
  TCCAGCCTTC CTTGTCTACA TGACAATTCC TCCTATATTC TTCCACTTTC TCTAAAATTC
  R
  TGATTTTTAA AAAATACTTG TGGACAAAAG CACATGGTCT TCAGAAGAGC AATTATTGGA
  GCCTCTGAAA CCATAGGGTG TTCACATCTT TTCTTCCTTG TGCTCTTCAT TATTTCCTTA
  ATCCTCTTTT TCCTATCTAA TCATTCTTGA CAATTTTTTT TTCCTATTTT TTTCTTTCTC
  TTTAAGCACT GAGATTTCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322911093	CHEV_9_38904008	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239058660					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:39007719 () rs orientation: forward

Symbol	Name	Function Class
Gm47085	predicted gene, 47085	544 bp upstream