rs239095363 SNP Detail

Summary

• ID
  rs239095363
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:11687664 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCATCATCC TCCTGCCTCA
  TCCTCCCAGC TGCTGGGATT ATAAATATGC CACCAGGCTA CATACCTTAC ATTGCAACAT
  TAAGTAGCAT AAAACAAGTA ATCAGAAACC AGACAATTGA TAAAGGGGAA TTGTTAACCG
  GGTGAACACA CTACACAGCC ATCCGTTCAA ATAACAAACA CTCCCTGTGA AGGTGATATT
  R
  AGAAATGTTC CAGTCTACAT AGACAAGTGT GATGTTTAAT TCACTGAGCA GTGACTAATG
  CGTGGGAAAT ATGAGACGTC ATCTGTCTGT CTCTAGTTCA TAATCGGTGA GGCAAGAGCA
  CAGCGTAATA GTTTTGGTAT TACTTGGGTG CTTGCACTGA ATGGTGGGCT CTTGTGTTTC
  AAGCTTCTTT CACTGAGAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322492737	CHEV_8_11637664	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239095363					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:11687664 () rs orientation: forward

Symbol	Name	Function Class
Ankrd10	ankyrin repeat domain 10	1907 bp upstream
Cpgi20087	CpG island 20087	997 bp distal
Gm45592	predicted gene 45592	within coordinates
Gm64331	predicted gene, 64331	within coordinates
Mir7238	microRNA 7238	1928 bp upstream
Rr186041	regulatory region 186041	663 bp distal
Rr400761	regulatory region 400761	1646 bp downstream
Tssr80392	transcription start site region 80392	1941 bp upstream
Tssr80393	transcription start site region 80393	1921 bp upstream
Tssr80394	transcription start site region 80394	1899 bp upstream