rs239100283 SNP Detail

Summary

• ID
  rs239100283
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:81669119 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACTGGTGCC TGAAAAATAT CCTATGATAC
  TAGTATTCCC AGGGATCAAT TGAAAAGTCT TATTGTCATT CCCAAGTCCT CAGAGTCCAG
  TGTTTAAAAA TTGCCAAGAA CAAACACACC TGAGAACATA CTTgtctgaa tgagatttgc
  Y
  cccataggct cacatgcttg aatgctttgt ccccagttaa tgaaactgtt tgaggagaca
  attggctttg ttggactaga tgtggccttt ctggaaagga ggtgaccttg tgggagcaga
  tgagacacta gagcaagcct tcaactaaat                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319815886	CHEV_1_81687979	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239100283					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:81669119 () rs orientation: forward

Symbol	Name	Function Class
Gm70553	predicted gene, 70553	1825 bp downstream