rs239101989 SNP Detail

Summary

• ID
  rs239101989
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:37132487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTGGTGTCT TAGGGACACT GTGAGGCTTG
  GTATTCTGGA ACATCTTTCA AATGTTACAT GAGATCCTGT CTCTAACAGA CAAAAAATAC
  ACAATAAAGC ATCTCTAATT CTGTTGGAac tatgaatgat tgttatataa aattgttata
  K
  tgtagatcag gttgaacttg gactcagaga tctggctgcc tctgcctctc aggtgctggg
  actaaagctg tgcactgcca aacctggTGA GTCTGTGCCC ACCCCCCCtt ttttttagtg
  atttatttat ttttctttat gtgcactgat                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324925272	CHEV_15_37061998	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239101989					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:37132487 () rs orientation: forward

Symbol	Name	Function Class
Gm41301	predicted gene, 41301	980 bp downstream
Gm41302	predicted gene, 41302	within coordinates
Gm63629	predicted gene, 63629	1737 bp downstream