rs239115873 SNP Detail

Summary

• ID
  rs239115873
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117584697 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGGACAGT CCCTGTTTTC
  TTTTTCTTTC TTTTTTTTTT TTTTCCGAGA CAGGGTTTCT CTGTGTGGCC CACGCTGTCC
  TGGAACTCAC TCTGTAGACC AGACTGGCCC GGAACTAAGA AATCCGCCTG CCTCTGCCTT
  CCAAGTGCTG GGATTAAAGG AGTGCCCCAC CATTTTCGGC TTCCCTGTTT TCAAAGCTCA
  S
  CAGCTCTTAC TGTTTGCTAG AAATAGTCCC ATTGTCACCC TCCCCTACAC GTGTGTGGAT
  TACCCTTCCC TGCTCCCTCA GTAAGAGCCT GGGAAGTGTT CTGGCTAGGT GTGATGGAGT
  ACAGTTTCAG TCCCAGTCCC AGGAGTGGGA GGGCAGAGGC CTGTGGATCT CTGCCAGTTC
  AAAAGAGTTC CATGAGTTCC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323499204	CHEV_10_117185848	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239115873					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117584697 () rs orientation: forward

Symbol	Name	Function Class
Gm66856	predicted gene, 66856	769 bp downstream
Nup107	nucleoporin 107	1829 bp downstream
Rr439612	regulatory region 439612	1951 bp distal