rs239161920 SNP Detail

Summary

• ID
  rs239161920
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8857220 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATATACAC ACATATACAT
  ACGTACATAC AAACACACAC ATATACACAC TTATACACAC ATACACACAT ACACCTCCTA
  CACACATATA GACACATTTA TATACACATA CACACAGACA TATAGATAAA CACACACTTA
  TACACACATA CACAAACATA TACATGCATA TACACAATAC ATATAAACAC ACATCCACAT
  A
  CACAAACACA CACACGTACA CATATACACA AACACACACA CTTCCACACA TACATATGTA
  CCTATAATAA TAAACAATAA TAAATAAAAA ATGCCAAAAA TTAAAATCAC ATTCGTATAG
  ACTATTGGTA ACTCAAGTCC AACTGTAGAC TTGAGCAAAA TGTTGGAGAG AAAGTTGGGT
  GGTTAAAAGT TATGCTGCTC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323246143	CHEV_10_8701274	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239161920					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8857220 () rs orientation: forward

Symbol	Name	Function Class
Rr223851	regulatory region 223851	1381 bp proximal
Rr223852	regulatory region 223852	1858 bp proximal