rs239205535 SNP Detail

Summary

• ID
  rs239205535
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:84339510 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTGT TCCACCTGCG TAGTTTGAGA
  K
  ACGACATAGA TTGAGATTCT GTTGC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322297947	CHEV_7_91838812	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239205535					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:84339510 () rs orientation: forward

Symbol	Name	Function Class
2610206C17Rik	RIKEN cDNA 2610206C17 gene	within coordinates
Cpgi19383	CpG island 19383	within coordinates
Rr400423	regulatory region 400423	187 bp downstream
Rr650631	regulatory region 650631	1269 bp distal
Rr650632	regulatory region 650632	548 bp distal
Rr650633	regulatory region 650633	356 bp distal
Rr650634	regulatory region 650634	within coordinates
Tssr73444	transcription start site region 73444	481 bp upstream
Tssr73445	transcription start site region 73445	468 bp upstream
Tssr73446	transcription start site region 73446	403 bp upstream
Tssr73447	transcription start site region 73447	384 bp upstream
Tssr73448	transcription start site region 73448	363 bp upstream
Tssr73449	transcription start site region 73449	338 bp upstream
Tssr73450	transcription start site region 73450	311 bp upstream
Zfand6	zinc finger, AN1-type domain 6	286 bp upstream